Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
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potAPolyamine transport protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (361 aa)    
Predicted Functional Partners:
potB
Polyamine transport protein PotB; Identified by sequence similarity; putative; ORF located using Blastx/COG1176/TC:3.A.1.11.1.
 0.997
potC
Polyamine transport protein PotC; Identified by sequence similarity; putative; ORF located using Blastx/COG1177/TC:3.A.1.11.1.
 0.996
potD
Polyamine ABC transporter protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.984
potF1
Polyamine ABC transporter system, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.973
potF2
Polyamine ABC transporter system, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.972
potH
Putrescine transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1176/TC:3.A.1.11.2.
 
 0.947
potI
Putrescine transport system permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG1177/TC:3.A.1.11.2.
 
 
 0.927
CV_2458
Probable ABC transport system, permease protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842.
 
      0.899
CV_2457
Probable ABC superfamily, transport protein; Identified by sequence similarity; putative; ORF located using Glimmer/GeneMark/Blastx/COG0842/TC:3.A.1.102.1.
 
   
  0.849
potF3
Polyamine ABC transporter system, substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 
 0.818
Your Current Organism:
Chromobacterium violaceum
NCBI taxonomy Id: 243365
Other names: C. violaceum ATCC 12472, Chromobacterium violaceum ATCC 12472, Chromobacterium violaceum ATCC12472, Chromobacterium violaceum str. ATCC 12472
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