STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGF63652.1Autotransporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (900 aa)    
Predicted Functional Partners:
KGF63843.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.691
KGF62663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
KGF66367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
KGF62661.1
Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
KGF62662.1
Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.635
KGF62284.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
KGF64915.1
Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
KGF66579.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
KGF64515.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.600
KGF64022.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.556
Your Current Organism:
Pseudomonas lutea
NCBI taxonomy Id: 243924
Other names: CECT 5822, LMG 21974, LMG:21974, P. lutea, Pseudomonas lutea Peix et al. 2004, strain OK2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.