STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLO42411.1Thiamine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
KLO42410.1
Channel-forming protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
KLO42408.1
ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.765
xerD
Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.760
ppnK
Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.759
KLO42414.1
Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.759
KLO46081.1
LytR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.739
pyrG
CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.718
KLO42412.1
DNA recombination protein RecN; May be involved in recombinational repair of damaged DNA.
       0.634
KLO42415.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.593
KLO42416.1
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.568
Your Current Organism:
Mycobacterium nebraskense
NCBI taxonomy Id: 244292
Other names: ATCC BAA-837, DSM 44803, M. nebraskense, Mycobacterium nebraskense Mohamed et al. 2004, Mycobacterium nebraskiae, Mycobacterium sp. UNMC-MY1349
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