STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLO41177.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)    
Predicted Functional Partners:
KLO41260.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.752
KLO41176.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.751
KLO43797.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.709
KLO45723.1
Lipoprotein LprC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.697
KLO41172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.654
KLO45724.1
Lipoprotein LprB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.650
hemL
Glutamate-1-semialdehyde aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.647
KLO37539.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
KLO42646.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
KLO35349.1
Twin-arginine translocation pathway signal; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
Your Current Organism:
Mycobacterium nebraskense
NCBI taxonomy Id: 244292
Other names: ATCC BAA-837, DSM 44803, M. nebraskense, Mycobacterium nebraskense Mohamed et al. 2004, Mycobacterium nebraskiae, Mycobacterium sp. UNMC-MY1349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.