STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLO34901.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (393 aa)    
Predicted Functional Partners:
KLO34907.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.757
KLO34903.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.738
KLO34904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.733
KLO34908.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.689
KLO36267.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.686
KLO40696.1
Secretion protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.662
KLO34693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.662
KLO34902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.589
KLO34906.1
Secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.588
KLO34905.1
Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.583
Your Current Organism:
Mycobacterium nebraskense
NCBI taxonomy Id: 244292
Other names: ATCC BAA-837, DSM 44803, M. nebraskense, Mycobacterium nebraskense Mohamed et al. 2004, Mycobacterium nebraskiae, Mycobacterium sp. UNMC-MY1349
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.