STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900019385_00932Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_900019385_00931
Unannotated protein.
 
 0.999
GCA_900019385_01448
Unannotated protein.
 
 
    0.911
GCA_900019385_00933
Unannotated protein.
  
    0.834
GCA_900019385_00930
Unannotated protein.
       0.717
GCA_900019385_00929
Unannotated protein.
       0.702
GCA_900019385_01322
Unannotated protein.
  
  
 0.635
GCA_900019385_00259
Unannotated protein.
  
  
 0.628
GCA_900019385_00840
Unannotated protein.
   
  
 0.627
GCA_900019385_00928
Unannotated protein.
  
  
 0.596
GCA_900019385_00965
Unannotated protein.
  
 
 0.568
Your Current Organism:
uncultured Clostridia bacterium
NCBI taxonomy Id: 244328
Other names: u. Clostridia bacterium, uncultured Clostridia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.