STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900019385_01153Unannotated protein. (828 aa)    
Predicted Functional Partners:
GCA_900019385_01949
Unannotated protein.
  
 
 0.797
GCA_900019385_00646
Unannotated protein.
  
  
 0.796
GCA_900019385_00840
Unannotated protein.
    
  0.790
GCA_900019385_00654
Unannotated protein.
 
 0.760
GCA_900019385_00485
Unannotated protein.
    
  0.755
GCA_900019385_01912
Unannotated protein.
  
  0.698
GCA_900019385_00581
Unannotated protein.
  
     0.695
GCA_900019385_00579
Unannotated protein.
  
 
  0.653
GCA_900019385_01278
Unannotated protein.
  
     0.628
GCA_900019385_00544
Unannotated protein.
  
     0.624
Your Current Organism:
uncultured Clostridia bacterium
NCBI taxonomy Id: 244328
Other names: u. Clostridia bacterium, uncultured Clostridia sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.