STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900019385_01662Unannotated protein. (89 aa)    
Predicted Functional Partners:
GCA_900019385_00203
Unannotated protein.
 
     0.803
GCA_900019385_00202
Unannotated protein.
 
     0.774
GCA_900019385_00488
Unannotated protein.
 
     0.660
GCA_900019385_01663
Unannotated protein.
       0.565
GCA_900019385_00712
Unannotated protein.
  
     0.555
GCA_900019385_00709
Unannotated protein.
  
     0.545
GCA_900019385_00107
Unannotated protein.
 
    0.525
GCA_900019385_01664
Unannotated protein.
       0.517
GCA_900019385_00930
Unannotated protein.
  
     0.476
GCA_900019385_00475
Unannotated protein.
  
     0.466
Your Current Organism:
uncultured Clostridia bacterium
NCBI taxonomy Id: 244328
Other names: u. Clostridia bacterium, uncultured Clostridia sp.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.