STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW19292.1Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid). (237 aa)    
Predicted Functional Partners:
SFW30309.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
  
 0.945
SFW41727.1
Mannose-1-phosphate guanylyltransferase.
  
 
 0.938
SFW46023.1
Capsular exopolysaccharide family.
 
 
 0.857
SFW46044.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster.
 
 
 0.840
SFW42698.1
Capsular exopolysaccharide family.
 
 
 0.805
SFW15221.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.588
SFW49826.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.551
SFW49841.1
Hypothetical protein.
  
 
 0.541
SFW35790.1
Acyl transferase domain-containing protein.
  
  
 0.463
SFW19280.1
Transcriptional regulator, LacI family.
       0.444
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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