STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW27002.1DnaD and phage-associated domain-containing protein. (348 aa)    
Predicted Functional Partners:
SFW27011.1
DNA replication protein DnaC.
 
  
 0.916
SFW26554.1
Protein of unknown function.
  
     0.744
SFW32995.1
Hypothetical protein.
  
     0.666
SFW20651.1
Protein of unknown function.
  
     0.664
SFW32122.1
Cu+-exporting ATPase.
  
     0.650
SFW29477.1
Hypothetical protein.
  
     0.640
SFW16578.1
Protein of unknown function.
  
     0.610
SFW19469.1
Hypothetical protein.
  
     0.585
SFW46165.1
Transcriptional regulator, RpiR family.
  
     0.571
SFW24332.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.