STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW29046.1CotH protein. (517 aa)    
Predicted Functional Partners:
SFW31039.1
Carbohydrate binding domain-containing protein.
  
  
  0.720
SFW14934.1
Arabinoxylan arabinofuranohydrolase.
  
  
  0.706
SFW31478.1
Glucuronoarabinoxylan endo-1,4-beta-xylanase.
  
  
  0.699
SFW48973.1
Carbohydrate binding domain-containing protein.
  
  
  0.698
SFW28613.1
Enterochelin esterase.
  
  
  0.682
SFW44184.1
Enterochelin esterase.
  
  
  0.671
SFW44643.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.652
SFW39160.1
Mannan endo-1,4-beta-mannosidase; Belongs to the glycosyl hydrolase 26 family.
  
     0.637
SFW31470.1
Hypothetical protein.
  
  
  0.627
SFW23196.1
N-acetylmuramoyl-L-alanine amidase.
     
 0.624
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.