STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW31813.1Phage minor capsid protein 2. (526 aa)    
Predicted Functional Partners:
SFW31804.1
Phage portal protein, putative, A118 family.
 
    0.979
SFW31867.1
Minor capsid protein.
 
     0.837
SFW31818.1
Hypothetical protein.
       0.773
SFW31839.1
Hypothetical protein.
 
     0.751
SFW31832.1
Phage minor structural protein GP20.
  
    0.626
SFW31796.1
Phage integrase family protein.
       0.444
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.