STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW36788.1Phage integrase family protein. (494 aa)    
Predicted Functional Partners:
SFW52125.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.773
SFW51344.1
Mobilisation protein (MobC).
 
     0.768
SFW52133.1
Mobilisation protein (MobC).
 
     0.764
SFW47105.1
Hypothetical protein.
 
     0.757
SFW46970.1
Hypothetical protein.
 
     0.755
SFW50931.1
Adenine-specific DNA methylase, N12 class.
 
     0.747
SFW47455.1
Mobilisation protein (MobC).
 
     0.744
SFW54229.1
Hypothetical protein.
 
     0.701
SFW15714.1
ATP-dependent helicase/nuclease subunit A; ATP-dependent DNA helicase.
  
 0.695
SFW49107.1
Replication initiator protein A (RepA) N-terminus.
  
     0.658
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.