Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFW41622.1 | SFW41634.1 | SAMN02910447_02463 | SAMN02910447_02465 | Acetyltransferase (GNAT) family protein. | Hypothetical protein. | 0.596 |
SFW41622.1 | SFW41638.1 | SAMN02910447_02463 | SAMN02910447_02466 | Acetyltransferase (GNAT) family protein. | Arginine/lysine/ornithine decarboxylase. | 0.664 |
SFW41622.1 | speE | SAMN02910447_02463 | SAMN02910447_02464 | Acetyltransferase (GNAT) family protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.811 |
SFW41634.1 | SFW41622.1 | SAMN02910447_02465 | SAMN02910447_02463 | Hypothetical protein. | Acetyltransferase (GNAT) family protein. | 0.596 |
SFW41634.1 | SFW41638.1 | SAMN02910447_02465 | SAMN02910447_02466 | Hypothetical protein. | Arginine/lysine/ornithine decarboxylase. | 0.773 |
SFW41634.1 | speE | SAMN02910447_02465 | SAMN02910447_02464 | Hypothetical protein. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.596 |
SFW41638.1 | SFW41622.1 | SAMN02910447_02466 | SAMN02910447_02463 | Arginine/lysine/ornithine decarboxylase. | Acetyltransferase (GNAT) family protein. | 0.664 |
SFW41638.1 | SFW41634.1 | SAMN02910447_02466 | SAMN02910447_02465 | Arginine/lysine/ornithine decarboxylase. | Hypothetical protein. | 0.773 |
SFW41638.1 | speE | SAMN02910447_02466 | SAMN02910447_02464 | Arginine/lysine/ornithine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | 0.992 |
speE | SFW41622.1 | SAMN02910447_02464 | SAMN02910447_02463 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Acetyltransferase (GNAT) family protein. | 0.811 |
speE | SFW41634.1 | SAMN02910447_02464 | SAMN02910447_02465 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Hypothetical protein. | 0.596 |
speE | SFW41638.1 | SAMN02910447_02464 | SAMN02910447_02466 | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. | Arginine/lysine/ornithine decarboxylase. | 0.992 |