STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW43060.1ABC-2 family transporter protein. (265 aa)    
Predicted Functional Partners:
SFW43052.1
CubicO group peptidase, beta-lactamase class C family.
       0.762
SFW43081.1
ABC-2 type transport system ATP-binding protein.
       0.762
SFW43086.1
GntR family transcriptional regulator.
       0.762
SFW43069.1
Hypothetical protein.
       0.757
SFW43097.1
Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.461
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.