STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW46130.1DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family. (909 aa)    
Predicted Functional Partners:
SFW32228.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.752
SFW46140.1
ATP-dependent protease ClpP, protease subunit.
  
  
 0.745
SFW32242.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.728
SFW15925.1
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
 0.684
SFW47946.1
Integrase/recombinase XerD; Belongs to the 'phage' integrase family.
  
   
 0.657
SFW15986.1
Cell division protein FtsQ; Essential cell division protein.
   
 
 0.652
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
 
   
 0.628
mraZ
MraZ protein; Belongs to the MraZ family.
  
  
 0.607
SFW33078.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
   
 0.575
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
  
 0.571
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.