STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW48469.1Site-specific DNA recombinase. (546 aa)    
Predicted Functional Partners:
SFW48457.1
Recombinase.
 
     0.919
SFW48452.1
Site-specific DNA recombinase.
 
    
0.820
SFW49498.1
Putative amidoligase enzyme.
  
     0.727
SFW36739.1
Resolvase, N terminal domain.
  
     0.712
SFW53896.1
Site-specific DNA recombinase.
  
     0.662
SFW48417.1
Hypothetical protein.
       0.421
SFW48426.1
mRNA interferase MazF; Toxic component of a type II toxin-antitoxin (TA) system.
       0.421
SFW48432.1
ATP-dependent DNA helicase DinG.
       0.421
SFW48442.1
Hypothetical protein.
       0.421
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.