STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW54822.1NAD-dependent protein deacetylase, SIR2 family. (282 aa)    
Predicted Functional Partners:
SFW54831.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
     0.878
SFW54838.1
Uncharacterized protein, pyridoxamine 5'-phosphate oxidase (PNPOx-like) family.
 
    0.858
SFW54849.1
Predicted SnoaL-like aldol condensation-catalyzing enzyme.
     0.665
SFW20161.1
NUDIX domain-containing protein.
    
 0.616
SFW33386.1
TfoX N-terminal domain-containing protein.
    
   0.570
SFW37345.1
AraC-type DNA-binding protein.
  
    0.557
SFW54856.1
Hypothetical protein.
       0.554
SFW52771.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
     0.495
SFW41410.1
acetyl-CoA synthetase.
    
 0.484
SFW52930.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
     0.484
Your Current Organism:
Ruminococcus sp. YE71
NCBI taxonomy Id: 244362
Other names: R. sp. YE71
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.