STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcfd2Multiple coagulation factor deficiency 2. (169 aa)    
Predicted Functional Partners:
lman1
Lectin, mannose-binding, 1.
   
 0.995
ENSCSEP00000013425
SEC24 homolog C, COPII coat complex component.
     
 0.703
f5
Coagulation factor V; Belongs to the multicopper oxidase family.
     
 0.694
LOC103390729
Coagulation factor VIII, procoagulant component; Belongs to the multicopper oxidase family.
     
 0.694
sec24d
SEC24 homolog D, COPII coat complex component.
     
 0.666
scfd1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.661
uso1
USO1 vesicle transport factor.
   
 
 0.636
sec31a
SEC31 homolog A, COPII coat complex component.
     
 0.627
LOC103381934
SEC31 homolog B, COPII coat complex component.
     
 0.627
gosr2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
   
 
  0.627
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.