STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103379817Si:dkey-10o6.2; Belongs to the iron/ascorbate-dependent oxidoreductase family. (310 aa)    
Predicted Functional Partners:
ENSCSEP00000005767
Aminoadipate-semialdehyde dehydrogenase.
   
 
 0.913
ulk2
Unc-51 like autophagy activating kinase 2.
    
 
 0.493
ulk1
Unc-51 like autophagy activating kinase 1.
    
 
 0.493
LOC103384881
Serine/threonine kinase 35; Belongs to the protein kinase superfamily.
    
 
 0.493
trit1
tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.
   
  
 0.493
LOC103394708
PDLIM1 interacting kinase 1 like; Belongs to the protein kinase superfamily.
    
 
 0.493
LOC103398502
Si:ch211-63o20.7; Belongs to the protein kinase superfamily.
    
 
 0.493
Ulk3
Protein kinase domain-containing protein.
    
 
 0.493
LOC103386505
Serine/threonine kinase 35, like; Belongs to the protein kinase superfamily.
    
 
 0.493
fasn
Coiled-coil domain containing 57.
    
 0.478
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.