STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcnpPEST proteolytic signal containing nuclear protein. (171 aa)    
Predicted Functional Partners:
czh12orf65
Si:ch211-275j6.5.
      
 0.569
dnph1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base. Deoxyribonucleoside 5'-monophosphates containing purine bases are preferred to those containing pyrimidine bases.
      
 0.565
poli
Polymerase (DNA directed) iota.
      
 0.491
ube3c
Ubiquitin protein ligase E3C.
      
 0.483
mycbp2
MYC binding protein 2.
      
 0.480
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.479
LOC103380314
TUB like protein 4b; Belongs to the TUB family.
      
 0.463
tulp4
TUB like protein 4a; Belongs to the TUB family.
      
 0.463
LOC103384593
Prostaglandin E synthase 3a (cytosolic).
   
    0.439
PTGES3
Prostaglandin E synthase 3.
   
    0.439
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.