STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golim4Uncharacterized protein. (640 aa)    
Predicted Functional Partners:
nol9
Nucleolar protein 9.
      
 0.597
LOC103385298
Zinc finger and BTB domain containing 48.
      
 0.499
riok2
RIO kinase 2 (yeast).
      
 0.485
TMEM38B
Transmembrane protein 38B.
      
 0.485
ENSCSEP00000029158
Transmembrane protein 38A.
      
 0.485
insyn2b
Uncharacterized protein.
      
 0.443
LOC103381115
Tetratricopeptide repeat domain 9.
      
 0.443
stx5
Syntaxin 5A; Belongs to the syntaxin family.
     
 0.436
lipt1
Lipoyltransferase 1.
      
 0.433
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.