STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppibPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (216 aa)    
Predicted Functional Partners:
fbl
Fibrillarin.
   
 
 0.850
LOC103394375
Cartilage associated protein.
   
 0.833
p3h4
Prolyl 3-hydroxylase family member 4 (non-enzymatic).
   
 0.830
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
  
 0.811
p3h1
Prolyl 3-hydroxylase 1.
   
 0.792
tbl3
Transducin (beta)-like 3.
   
 
 0.739
LOC103383597
Protein disulfide-isomerase.
   
 0.736
p4hb
Protein disulfide-isomerase.
   
 0.736
p3h2
Prolyl 3-hydroxylase 2.
   
 0.734
p3h3
Prolyl 3-hydroxylase 3.
   
 0.734
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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