STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000002960RRM domain-containing protein. (133 aa)    
Predicted Functional Partners:
ENSCSEP00000002954
Si:ch1073-335m2.2.
 
      0.899
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 
 0.640
LOC103383736
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 
 0.640
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 
 0.537
wtap
WT1 associated protein.
    
 
 0.498
ncor1
Nuclear receptor corepressor 1.
   
 
 0.488
zc3h13
Zinc finger CCCH-type containing 13.
   
 
 0.459
thoc2
THO complex 2.
   
 
 0.424
mettl3
Methyltransferase like 3; Belongs to the MT-A70-like family.
    
 
 0.409
mettl14
Methyltransferase like 14; Belongs to the MT-A70-like family.
    
 
 0.401
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.