SNX27 protein (Cynoglossus semilaevis) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Gene Fusion

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Experiments

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[Homology]

Score

SNX27

Sorting nexin 27. (572 aa)

Predicted Functional Partners:

vps26a

0.900

otulin

0.873

Snx1

0.710

vps26b

0.676

LOC103394974

0.676

vps35

0.647

vps29

0.575

snx12

0.568

tbc1d5

0.528

LOC103387313

0.501

Your Current Organism:

Cynoglossus semilaevis

NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103387313	LOC103394974	ENSCSEP00000010203	ENSCSEP00000027495	CAP-ZIP_m domain-containing protein.	Uncharacterized protein.	0.441
LOC103387313	SNX27	ENSCSEP00000010203	ENSCSEP00000003461	CAP-ZIP_m domain-containing protein.	Sorting nexin 27.	0.501
LOC103387313	Snx1	ENSCSEP00000010203	ENSCSEP00000013569	CAP-ZIP_m domain-containing protein.	Sorting nexin 1b.	0.402
LOC103387313	tbc1d5	ENSCSEP00000010203	ENSCSEP00000018663	CAP-ZIP_m domain-containing protein.	TBC1 domain family, member 5.	0.549
LOC103387313	vps26a	ENSCSEP00000010203	ENSCSEP00000022041	CAP-ZIP_m domain-containing protein.	VPS26, retromer complex component A.	0.458
LOC103387313	vps26b	ENSCSEP00000010203	ENSCSEP00000023738	CAP-ZIP_m domain-containing protein.	VPS26, retromer complex component B.	0.441
LOC103387313	vps29	ENSCSEP00000010203	ENSCSEP00000020949	CAP-ZIP_m domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.746
LOC103387313	vps35	ENSCSEP00000010203	ENSCSEP00000013422	CAP-ZIP_m domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.799
LOC103394974	LOC103387313	ENSCSEP00000027495	ENSCSEP00000010203	Uncharacterized protein.	CAP-ZIP_m domain-containing protein.	0.441
LOC103394974	SNX27	ENSCSEP00000027495	ENSCSEP00000003461	Uncharacterized protein.	Sorting nexin 27.	0.676
LOC103394974	Snx1	ENSCSEP00000027495	ENSCSEP00000013569	Uncharacterized protein.	Sorting nexin 1b.	0.706
LOC103394974	snx12	ENSCSEP00000027495	ENSCSEP00000029865	Uncharacterized protein.	Sorting nexin 12.	0.897
LOC103394974	tbc1d5	ENSCSEP00000027495	ENSCSEP00000018663	Uncharacterized protein.	TBC1 domain family, member 5.	0.793
LOC103394974	vps26a	ENSCSEP00000027495	ENSCSEP00000022041	Uncharacterized protein.	VPS26, retromer complex component A.	0.964
LOC103394974	vps26b	ENSCSEP00000027495	ENSCSEP00000023738	Uncharacterized protein.	VPS26, retromer complex component B.	0.900
LOC103394974	vps29	ENSCSEP00000027495	ENSCSEP00000020949	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.964
LOC103394974	vps35	ENSCSEP00000027495	ENSCSEP00000013422	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.977
SNX27	LOC103387313	ENSCSEP00000003461	ENSCSEP00000010203	Sorting nexin 27.	CAP-ZIP_m domain-containing protein.	0.501
SNX27	LOC103394974	ENSCSEP00000003461	ENSCSEP00000027495	Sorting nexin 27.	Uncharacterized protein.	0.676
SNX27	Snx1	ENSCSEP00000003461	ENSCSEP00000013569	Sorting nexin 27.	Sorting nexin 1b.	0.710