STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103388243Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
c18h6orf62
Zgc:111986.
      
 0.499
ZADH2
Zinc binding alcohol dehydrogenase domain containing 2.
      
 0.483
miga2
Mitoguardin 2.
      
 0.436
romo1
Reactive oxygen species modulator 1.
      
 0.435
LOC103382149
TEF transcription factor, PAR bZIP family member a.
   
  
 0.409
LOC103386818
Period circadian clock 1b.
   
 
 0.405
per3
Period circadian clock 3.
   
 
 0.405
per2
PAS domain-containing protein.
   
 
 0.405
LOC103396076
Period circadian clock 2.
   
 
 0.405
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.