STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vwa8Von Willebrand factor A domain containing 8. (1300 aa)    
Predicted Functional Partners:
ENSCSEP00000004177
AAA_5 domain-containing protein.
 
    
0.910
fancm
Uncharacterized protein.
   
 0.665
LOC103398254
Survival of motor neuron 1, telomeric.
    
 0.644
pold1
DNA polymerase.
   
 0.620
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.618
nup205
Nucleoporin 205.
     
 0.615
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
 
 0.579
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.563
nup98
Nucleoporin 98.
    
 0.555
ddx20
DEAD-box helicase 20; Belongs to the DEAD box helicase family.
   
 0.555
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.