STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tube1Tubulin, epsilon 1; Belongs to the tubulin family. (474 aa)    
Predicted Functional Partners:
wdr90
WD repeat domain 90.
   
 0.761
LOC103392065
NME/NM23 family member 8; Belongs to the NDK family.
   
 0.683
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.665
LOC103378170
Doublecortin-like kinase 1b.
    
 
 0.652
Dclk1
Doublecortin-like kinase 1a.
    
 
 0.652
cenpk
Centromere protein K.
   
 0.648
LOC103389240
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
0.647
tubd1
Tubulin, delta 1; Belongs to the tubulin family.
  
 
0.647
LOC103384726
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
0.647
LOC103384708
Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
0.647
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
Server load: low (22%) [HD]