Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cct2 | cct3 | ENSCSEP00000028886 | ENSCSEP00000028524 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit gamma. | 0.999 |
cct2 | cct4 | ENSCSEP00000028886 | ENSCSEP00000032311 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit delta. | 0.999 |
cct2 | cct7 | ENSCSEP00000028886 | ENSCSEP00000026133 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. | 0.999 |
cct2 | pfdn1 | ENSCSEP00000028886 | ENSCSEP00000010490 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin subunit 1. | 0.862 |
cct2 | pfdn2 | ENSCSEP00000028886 | ENSCSEP00000000580 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin subunit 2. | 0.880 |
cct2 | pfdn4 | ENSCSEP00000028886 | ENSCSEP00000023412 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. | 0.869 |
cct2 | pfdn5 | ENSCSEP00000028886 | ENSCSEP00000005016 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin 5. | 0.887 |
cct2 | pfdn6 | ENSCSEP00000028886 | ENSCSEP00000027008 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin subunit 6. | 0.819 |
cct2 | tcp1 | ENSCSEP00000028886 | ENSCSEP00000000552 | Chaperonin containing TCP1, subunit 2 (beta). | T-complex 1. | 0.999 |
cct2 | vbp1 | ENSCSEP00000028886 | ENSCSEP00000027944 | Chaperonin containing TCP1, subunit 2 (beta). | Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. | 0.882 |
cct3 | cct2 | ENSCSEP00000028524 | ENSCSEP00000028886 | T-complex protein 1 subunit gamma. | Chaperonin containing TCP1, subunit 2 (beta). | 0.999 |
cct3 | cct4 | ENSCSEP00000028524 | ENSCSEP00000032311 | T-complex protein 1 subunit gamma. | T-complex protein 1 subunit delta. | 0.999 |
cct3 | cct7 | ENSCSEP00000028524 | ENSCSEP00000026133 | T-complex protein 1 subunit gamma. | T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin. | 0.999 |
cct3 | pfdn1 | ENSCSEP00000028524 | ENSCSEP00000010490 | T-complex protein 1 subunit gamma. | Prefoldin subunit 1. | 0.889 |
cct3 | pfdn2 | ENSCSEP00000028524 | ENSCSEP00000000580 | T-complex protein 1 subunit gamma. | Prefoldin subunit 2. | 0.828 |
cct3 | pfdn4 | ENSCSEP00000028524 | ENSCSEP00000023412 | T-complex protein 1 subunit gamma. | Prefoldin subunit 4; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit beta family. | 0.800 |
cct3 | pfdn5 | ENSCSEP00000028524 | ENSCSEP00000005016 | T-complex protein 1 subunit gamma. | Prefoldin 5. | 0.887 |
cct3 | pfdn6 | ENSCSEP00000028524 | ENSCSEP00000027008 | T-complex protein 1 subunit gamma. | Prefoldin subunit 6. | 0.700 |
cct3 | tcp1 | ENSCSEP00000028524 | ENSCSEP00000000552 | T-complex protein 1 subunit gamma. | T-complex 1. | 0.999 |
cct3 | vbp1 | ENSCSEP00000028524 | ENSCSEP00000027944 | T-complex protein 1 subunit gamma. | Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family. | 0.804 |
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