STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000005276IF rod domain-containing protein; Belongs to the intermediate filament family. (348 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.824
LOC103392282
RAN binding protein 2.
   
 0.538
tep1
Uncharacterized protein.
   
 0.501
rbbp5
Retinoblastoma binding protein 5.
    
 0.491
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.489
LOC103394748
Lysine (K)-specific demethylase 6B, b.
   
 0.479
ENSCSEP00000003948
Lysine (K)-specific demethylase 6A.
    
 0.475
KDM6B
Lysine demethylase 6B.
    
 0.475
kdm6a
Lysine (K)-specific demethylase 6A, like.
   
 0.475
LOC103384642
Keratin 8; Belongs to the intermediate filament family.
   
0.445
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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