STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103379368Uncharacterized protein. (166 aa)    
Predicted Functional Partners:
smc3
Structural maintenance of chromosomes 3.
   
 0.873
STAG1
Stromal antigen 1a.
 
     0.858
pds5a
PDS5 cohesin associated factor A.
   
 0.814
pds5b
PDS5 cohesin associated factor B.
   
 0.814
smc1a
Structural maintenance of chromosomes protein.
   
 0.808
LOC103379931
Structural maintenance of chromosomes protein.
   
 0.808
ENSCSEP00000011663
Uncharacterized protein.
   
 0.808
LOC103388613
RAD21 cohesin complex component a.
   
 0.775
RAD21
RAD21 cohesin complex component.
   
 0.775
LOC103385399
RAD21 cohesin complex component like 1.
   
 0.775
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.