STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000006696Rab-GAP TBC domain-containing protein. (437 aa)    
Predicted Functional Partners:
ulk2
Unc-51 like autophagy activating kinase 2.
    
  0.585
ulk1
Unc-51 like autophagy activating kinase 1.
    
  0.585
trappc8
Trafficking protein particle complex 8.
    
 
 0.549
LOC103380107
RAB, member of RAS oncogene family-like 2.
    
 0.498
LOC103376760
RAB11B, member RAS oncogene family, a.
    
 0.498
LOC103376755
Uncharacterized protein.
    
 0.498
LOC103378951
RAB11a, member RAS oncogene family.
    
 0.498
LOC103388827
RAB25, member RAS oncogene family b.
    
 0.498
LOC103388828
RAB11a, member RAS oncogene family, like.
    
 0.498
LOC103395887
Uncharacterized protein.
    
 0.498
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.