STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setd2SET domain containing 2, histone lysine methyltransferase. (2631 aa)    
Predicted Functional Partners:
polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.951
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.933
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.907
ENSCSEP00000006378
Histone H3; Belongs to the histone H3 family.
   
 0.850
ENSCSEP00000010656
Histone domain-containing protein.
   
 0.850
H3C14
Histone domain-containing protein.
   
 0.850
ENSCSEP00000014187
Histone H3; Belongs to the histone H3 family.
   
 0.850
LOC103381709
Histone H3; Belongs to the histone H3 family.
   
 0.850
LOC103389096
Histone domain-containing protein.
   
 0.850
LOC103394976
Histone H3; Belongs to the histone H3 family.
   
 0.850
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.