STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103391766Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (295 aa)    
Predicted Functional Partners:
LOC103390511
Malate synthase-like.
  
 
 0.767
LOC103392550
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
 0.685
LOC103376812
Serine--pyruvate aminotransferase.
  
 
 0.646
LOC103396059
Serine--pyruvate aminotransferase.
  
 
 0.646
LOC103388294
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.640
psat1
Phosphoserine aminotransferase.
     
 0.640
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
 
 0.640
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
  
 
 0.616
glyctk
Glycerate kinase.
  
 
 0.615
IDNK
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.587
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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