Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103377746 | LOC103385553 | ENSCSEP00000007187 | ENSCSEP00000033237 | Protein kinase domain-containing protein. | Colony stimulating factor 1b (macrophage). | 0.450 |
LOC103377746 | gdnf | ENSCSEP00000007187 | ENSCSEP00000024335 | Protein kinase domain-containing protein. | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | 0.403 |
LOC103377746 | il34 | ENSCSEP00000007187 | ENSCSEP00000022234 | Protein kinase domain-containing protein. | Interleukin 34. | 0.491 |
LOC103377746 | kitlg | ENSCSEP00000007187 | ENSCSEP00000032997 | Protein kinase domain-containing protein. | Kit ligand a. | 0.492 |
LOC103385553 | LOC103377746 | ENSCSEP00000033237 | ENSCSEP00000007187 | Colony stimulating factor 1b (macrophage). | Protein kinase domain-containing protein. | 0.450 |
LOC103385553 | gdnf | ENSCSEP00000033237 | ENSCSEP00000024335 | Colony stimulating factor 1b (macrophage). | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | 0.431 |
LOC103385553 | il34 | ENSCSEP00000033237 | ENSCSEP00000022234 | Colony stimulating factor 1b (macrophage). | Interleukin 34. | 0.946 |
LOC103385553 | kitlg | ENSCSEP00000033237 | ENSCSEP00000032997 | Colony stimulating factor 1b (macrophage). | Kit ligand a. | 0.407 |
gdnf | LOC103377746 | ENSCSEP00000024335 | ENSCSEP00000007187 | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | Protein kinase domain-containing protein. | 0.403 |
gdnf | LOC103385553 | ENSCSEP00000024335 | ENSCSEP00000033237 | Glial cell line-derived neurotrophic factor; Neurotrophic factor that enhances survival and morphological differentiation of dopaminergic neurons and increases their high- affinity dopamine uptake. | Colony stimulating factor 1b (macrophage). | 0.431 |
il34 | LOC103377746 | ENSCSEP00000022234 | ENSCSEP00000007187 | Interleukin 34. | Protein kinase domain-containing protein. | 0.491 |
il34 | LOC103385553 | ENSCSEP00000022234 | ENSCSEP00000033237 | Interleukin 34. | Colony stimulating factor 1b (macrophage). | 0.946 |
kitlg | LOC103377746 | ENSCSEP00000032997 | ENSCSEP00000007187 | Kit ligand a. | Protein kinase domain-containing protein. | 0.492 |
kitlg | LOC103385553 | ENSCSEP00000032997 | ENSCSEP00000033237 | Kit ligand a. | Colony stimulating factor 1b (macrophage). | 0.407 |