STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqrAquarius intron-binding spliceosomal factor. (1377 aa)    
Predicted Functional Partners:
prpf19
Pre-mRNA processing factor 19.
    
 0.999
xab2
XPA binding protein 2.
   
 0.999
crnkl1
Crooked neck pre-mRNA splicing factor 1.
    
 0.997
rbm22
RNA binding motif protein 22.
    
 0.995
bud31
BUD31 homolog.
    
  0.993
ppie
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
    
 0.992
snw1
SNW domain containing 1.
    
  0.992
LOC103386836
ISY1 splicing factor homolog.
    
 0.992
eftud2
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.991
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 
 0.990
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.