Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSCSEP00000000321 | ENSCSEP00000014328 | ENSCSEP00000000321 | ENSCSEP00000014328 | Uncharacterized protein. | Nuclear receptor coactivator 3. | 0.733 |
ENSCSEP00000000321 | LOC103381159 | ENSCSEP00000000321 | ENSCSEP00000004691 | Uncharacterized protein. | Nuclear receptor coactivator 1. | 0.733 |
ENSCSEP00000000321 | LOC103385997 | ENSCSEP00000000321 | ENSCSEP00000005889 | Uncharacterized protein. | Nuclear receptor subfamily 1, group D, member 4b. | 0.402 |
ENSCSEP00000000321 | LOC103386109 | ENSCSEP00000000321 | ENSCSEP00000007573 | Uncharacterized protein. | Vitamin D receptor b. | 0.694 |
ENSCSEP00000000321 | LOC103388356 | ENSCSEP00000000321 | ENSCSEP00000006514 | Uncharacterized protein. | Nuclear receptor subfamily 1, group D, member 2a. | 0.402 |
ENSCSEP00000000321 | Ncoa3 | ENSCSEP00000000321 | ENSCSEP00000032634 | Uncharacterized protein. | Uncharacterized protein. | 0.733 |
ENSCSEP00000000321 | med1 | ENSCSEP00000000321 | ENSCSEP00000011890 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.778 |
ENSCSEP00000000321 | ncoa2 | ENSCSEP00000000321 | ENSCSEP00000021336 | Uncharacterized protein. | Nuclear receptor coactivator 2. | 0.733 |
ENSCSEP00000000321 | ncor1 | ENSCSEP00000000321 | ENSCSEP00000025126 | Uncharacterized protein. | Nuclear receptor corepressor 1. | 0.874 |
ENSCSEP00000000321 | rxra | ENSCSEP00000000321 | ENSCSEP00000008003 | Uncharacterized protein. | Retinoid X receptor, alpha a. | 0.906 |
ENSCSEP00000014328 | ENSCSEP00000000321 | ENSCSEP00000014328 | ENSCSEP00000000321 | Nuclear receptor coactivator 3. | Uncharacterized protein. | 0.733 |
ENSCSEP00000014328 | LOC103385997 | ENSCSEP00000014328 | ENSCSEP00000005889 | Nuclear receptor coactivator 3. | Nuclear receptor subfamily 1, group D, member 4b. | 0.696 |
ENSCSEP00000014328 | LOC103386109 | ENSCSEP00000014328 | ENSCSEP00000007573 | Nuclear receptor coactivator 3. | Vitamin D receptor b. | 0.752 |
ENSCSEP00000014328 | LOC103388356 | ENSCSEP00000014328 | ENSCSEP00000006514 | Nuclear receptor coactivator 3. | Nuclear receptor subfamily 1, group D, member 2a. | 0.696 |
ENSCSEP00000014328 | med1 | ENSCSEP00000014328 | ENSCSEP00000011890 | Nuclear receptor coactivator 3. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.604 |
ENSCSEP00000014328 | ncor1 | ENSCSEP00000014328 | ENSCSEP00000025126 | Nuclear receptor coactivator 3. | Nuclear receptor corepressor 1. | 0.612 |
ENSCSEP00000014328 | rxra | ENSCSEP00000014328 | ENSCSEP00000008003 | Nuclear receptor coactivator 3. | Retinoid X receptor, alpha a. | 0.733 |
LOC103381159 | ENSCSEP00000000321 | ENSCSEP00000004691 | ENSCSEP00000000321 | Nuclear receptor coactivator 1. | Uncharacterized protein. | 0.733 |
LOC103381159 | LOC103385997 | ENSCSEP00000004691 | ENSCSEP00000005889 | Nuclear receptor coactivator 1. | Nuclear receptor subfamily 1, group D, member 4b. | 0.696 |
LOC103381159 | LOC103386109 | ENSCSEP00000004691 | ENSCSEP00000007573 | Nuclear receptor coactivator 1. | Vitamin D receptor b. | 0.752 |
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