Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc171Coiled-coil domain containing 171. (1080 aa)    
Predicted Functional Partners:
c8h12orf45
Si:dkey-48p11.3.
    
  0.781
lmod1
WH2 domain-containing protein.
    
 
 0.751
tceanc2
TFIIS N-terminal domain-containing protein.
      
 0.745
PLCB4
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase; The production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3) is mediated by activated phosphatidylinositol-specific phospholipase C enzymes.
     
 0.670
vegfc
Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.
     
 0.669
nkain1
Sodium/potassium transporting ATPase interacting 1.
      
 0.580
nkain2
Sodium/potassium transporting ATPase interacting 2.
      
 0.580
LOC103383745
Tyrosinase-related protein 1b.
    
 0.525
LOC103390683
Tyrosinase related protein 1.
    
 0.525
dct
Dopachrome tautomerase.
    
 0.525
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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