STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxd9Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family. (280 aa)    
Predicted Functional Partners:
hoxc6
Homeobox C6a.
   
 
0.861
LOC103392870
Pre-B-cell leukemia transcription factor 4.
    
 
 0.657
LOC103388952
Pre-B-cell leukemia homeobox 2.
    
 
 0.657
LOC103396165
Pre-B-cell leukemia homeobox 1b.
    
 
 0.657
ENSCSEP00000028614
Homeobox domain-containing protein.
    
 
 0.657
hoxc8
Homeobox C8a.
   
 
0.496
LOC103393566
Homeobox B8a.
   
 
0.496
ENSCSEP00000019934
Homeobox domain-containing protein.
   
 
0.492
LOC103381880
Homeobox B6b.
   
 
0.492
LOC103393557
Homeobox B4a.
  
 
0.475
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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