STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erc1ELKS/RAB6-interacting/CAST family member 1a. (1158 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 
 0.795
ENSCSEP00000021450
Regulating synaptic membrane exocytosis 2a.
    
 
 0.795
ENSCSEP00000029451
PDZ domain-containing protein.
    
 
 0.795
yeats4
YEATS domain containing 4.
    
 
 0.483
Dcp1b
Decapping mRNA 1B.
    
 
 0.483
CACNA2D4
Calcium voltage-gated channel auxiliary subunit alpha2delta 4.
      
 0.479
LOC103386995
Regulating synaptic membrane exocytosis 1a.
    
 
 0.454
rims3
Regulating synaptic membrane exocytosis 3.
    
 
 0.454
ENSCSEP00000029424
C2 domain-containing protein.
    
 
 0.454
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.