STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sema5bSema domain-containing protein. (1122 aa)    
Predicted Functional Partners:
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.680
ENSCSEP00000005305
Sema domain-containing protein.
    
0.673
LOC103380335
Plexin b2b.
    
 0.673
LOC103384373
Plexin B3.
    
 0.673
LOC103385716
Macrophage stimulating 1 receptor a.
    
 0.595
LOC103386279
Macrophage stimulating 1 receptor b.
    
 0.595
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.595
asns
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.511
neil1
Nei-like DNA glycosylase 1.
      
 0.495
adar
Adenosine deaminase RNA specific.
      
 0.474
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.