Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103386878 | atp5f1c | ENSCSEP00000000751 | ENSCSEP00000031417 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | ATP synthase subunit gamma. | 0.452 |
LOC103386878 | cdc5l | ENSCSEP00000000751 | ENSCSEP00000027101 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | CDC5 cell division cycle 5-like (S. pombe). | 0.410 |
LOC103386878 | ddx4 | ENSCSEP00000000751 | ENSCSEP00000009577 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.764 |
LOC103386878 | eftud2 | ENSCSEP00000000751 | ENSCSEP00000026325 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | Elongation factor Tu GTP binding domain containing 2. | 0.461 |
LOC103386878 | pes1 | ENSCSEP00000000751 | ENSCSEP00000027577 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.582 |
LOC103386878 | prpf6 | ENSCSEP00000000751 | ENSCSEP00000028996 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). | 0.607 |
LOC103386878 | sf3b3 | ENSCSEP00000000751 | ENSCSEP00000022296 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | Splicing factor 3b, subunit 3. | 0.612 |
atp5f1c | LOC103386878 | ENSCSEP00000031417 | ENSCSEP00000000751 | ATP synthase subunit gamma. | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | 0.452 |
atp5f1c | atp5pd | ENSCSEP00000031417 | ENSCSEP00000019632 | ATP synthase subunit gamma. | ATP synthase peripheral stalk subunit d. | 0.999 |
atp5f1c | atp5po | ENSCSEP00000031417 | ENSCSEP00000024236 | ATP synthase subunit gamma. | ATP synthase peripheral stalk subunit OSCP. | 0.999 |
atp5f1c | ddx4 | ENSCSEP00000031417 | ENSCSEP00000009577 | ATP synthase subunit gamma. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.754 |
atp5f1c | eftud2 | ENSCSEP00000031417 | ENSCSEP00000026325 | ATP synthase subunit gamma. | Elongation factor Tu GTP binding domain containing 2. | 0.777 |
atp5pd | atp5f1c | ENSCSEP00000019632 | ENSCSEP00000031417 | ATP synthase peripheral stalk subunit d. | ATP synthase subunit gamma. | 0.999 |
atp5pd | atp5po | ENSCSEP00000019632 | ENSCSEP00000024236 | ATP synthase peripheral stalk subunit d. | ATP synthase peripheral stalk subunit OSCP. | 0.999 |
atp5pd | ddx4 | ENSCSEP00000019632 | ENSCSEP00000009577 | ATP synthase peripheral stalk subunit d. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.674 |
atp5po | atp5f1c | ENSCSEP00000024236 | ENSCSEP00000031417 | ATP synthase peripheral stalk subunit OSCP. | ATP synthase subunit gamma. | 0.999 |
atp5po | atp5pd | ENSCSEP00000024236 | ENSCSEP00000019632 | ATP synthase peripheral stalk subunit OSCP. | ATP synthase peripheral stalk subunit d. | 0.999 |
atp5po | ddx4 | ENSCSEP00000024236 | ENSCSEP00000009577 | ATP synthase peripheral stalk subunit OSCP. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.720 |
atp5po | eftud2 | ENSCSEP00000024236 | ENSCSEP00000026325 | ATP synthase peripheral stalk subunit OSCP. | Elongation factor Tu GTP binding domain containing 2. | 0.768 |
cdc5l | LOC103386878 | ENSCSEP00000027101 | ENSCSEP00000000751 | CDC5 cell division cycle 5-like (S. pombe). | DEAD (Asp-Glu-Ala-Asp) box polypeptide 43. | 0.410 |
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