STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmco3Transmembrane and coiled-coil domains 3. (687 aa)    
Predicted Functional Partners:
nqo1
Flavodoxin_2 domain-containing protein.
  
 
 0.738
LOC103392072
Flavodoxin_2 domain-containing protein.
  
 
 0.738
LOC103384935
Ribosomal modification protein rimK-like family member A.
     
 0.711
treh
Trehalase.
      
 0.664
yipf6
Protein YIPF.
      
 0.655
LOC103382807
Cation/H+ exchanger protein 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
      
 0.642
oca2
Oculocutaneous albinism II.
     
 0.621
ATP6
ATP synthase subunit a.
  
  
 0.612
gtpbp6
GTP binding protein 6 (putative).
     
 0.602
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
     
 0.574
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.