STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxylp12-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family. (516 aa)    
Predicted Functional Partners:
fam20b
FAM20B glycosaminoglycan xylosylkinase.
      
 0.541
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
      
 0.485
ushbp1
Usher syndrome 1C binding protein 1.
      
 0.479
tmem196
Uncharacterized protein.
      
 0.474
ENSCSEP00000025259
Exostosin-like glycosyltransferase 2.
      
 0.448
SCML4
Scm polycomb group protein like 4.
      
 0.446
ap5m1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
      
 0.441
glce
Glucuronic acid epimerase b.
      
 0.430
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.