STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103387319Tet methylcytosine dioxygenase 1. (2153 aa)    
Predicted Functional Partners:
arid4b
Translocase of outer mitochondrial membrane 20.
  
 
 0.665
gnmt
Glycine N-methyltransferase.
      
 0.605
dnmt1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.546
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 
 0.536
arid4a
AT rich interactive domain 4A (RBP1-like).
   
 
 0.529
LOC103379812
Thymine DNA glycosylase, tandem duplicate 1.
      
 0.495
uhrf1
Ubiquitin-like with PHD and ring finger domains 1.
      
 0.489
LOC103389210
POU domain protein.
    
 
 0.482
tcf20
Transcription factor 20.
  
   0.434
LOC103396573
Uncharacterized protein.
      
 0.424
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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