Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Atm | pidd1 | ENSCSEP00000003106 | ENSCSEP00000012126 | Non-specific serine/threonine protein kinase. | P53-induced death domain protein 1. | 0.743 |
CASK | CASK-2 | ENSCSEP00000001381 | ENSCSEP00000017767 | Calcium/calmodulin dependent serine protein kinase. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.753 |
CASK | ENSCSEP00000001398 | ENSCSEP00000001381 | ENSCSEP00000001398 | Calcium/calmodulin dependent serine protein kinase. | Protein kinase domain-containing protein. | 0.963 |
CASK | pidd1 | ENSCSEP00000001381 | ENSCSEP00000012126 | Calcium/calmodulin dependent serine protein kinase. | P53-induced death domain protein 1. | 0.735 |
CASK-2 | CASK | ENSCSEP00000017767 | ENSCSEP00000001381 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Calcium/calmodulin dependent serine protein kinase. | 0.753 |
CASK-2 | ENSCSEP00000001398 | ENSCSEP00000017767 | ENSCSEP00000001398 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Protein kinase domain-containing protein. | 0.751 |
CASK-2 | pidd1 | ENSCSEP00000017767 | ENSCSEP00000012126 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | P53-induced death domain protein 1. | 0.735 |
ENSCSEP00000001398 | CASK | ENSCSEP00000001398 | ENSCSEP00000001381 | Protein kinase domain-containing protein. | Calcium/calmodulin dependent serine protein kinase. | 0.963 |
ENSCSEP00000001398 | CASK-2 | ENSCSEP00000001398 | ENSCSEP00000017767 | Protein kinase domain-containing protein. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.751 |
ENSCSEP00000001398 | pidd1 | ENSCSEP00000001398 | ENSCSEP00000012126 | Protein kinase domain-containing protein. | P53-induced death domain protein 1. | 0.735 |
ENSCSEP00000005792 | casp2 | ENSCSEP00000005792 | ENSCSEP00000031528 | CASP2 and RIPK1 domain containing adaptor with death domain. | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.959 |
ENSCSEP00000005792 | pidd1 | ENSCSEP00000005792 | ENSCSEP00000012126 | CASP2 and RIPK1 domain containing adaptor with death domain. | P53-induced death domain protein 1. | 0.983 |
ENSCSEP00000023441 | pidd1 | ENSCSEP00000023441 | ENSCSEP00000012126 | Ig-like domain-containing protein. | P53-induced death domain protein 1. | 0.712 |
LOC103378628 | pidd1 | ENSCSEP00000000866 | ENSCSEP00000012126 | LIM domain-containing protein. | P53-induced death domain protein 1. | 0.714 |
LOC103392273 | pidd1 | ENSCSEP00000020741 | ENSCSEP00000012126 | LIM and senescent cell antigen-like domains 2. | P53-induced death domain protein 1. | 0.714 |
casp2 | ENSCSEP00000005792 | ENSCSEP00000031528 | ENSCSEP00000005792 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | CASP2 and RIPK1 domain containing adaptor with death domain. | 0.959 |
casp2 | pidd1 | ENSCSEP00000031528 | ENSCSEP00000012126 | Caspase 2, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | P53-induced death domain protein 1. | 0.898 |
pidd1 | Atm | ENSCSEP00000012126 | ENSCSEP00000003106 | P53-induced death domain protein 1. | Non-specific serine/threonine protein kinase. | 0.743 |
pidd1 | CASK | ENSCSEP00000012126 | ENSCSEP00000001381 | P53-induced death domain protein 1. | Calcium/calmodulin dependent serine protein kinase. | 0.735 |
pidd1 | CASK-2 | ENSCSEP00000012126 | ENSCSEP00000017767 | P53-induced death domain protein 1. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.735 |
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