STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103387376LIM domain binding 1a. (383 aa)    
Predicted Functional Partners:
LOC103396034
T-cell acute lymphocytic leukemia 1.
    
 0.913
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.907
lmo1
LIM domain only 1.
    
 0.840
lmo3
LIM domain only 3.
    
 0.827
LOC103384168
BHLH domain-containing protein.
    
 0.810
lhx9
LIM homeobox 9.
    
 0.676
lhx2
LIM homeobox 2b.
    
 0.676
ENSCSEP00000028768
Uncharacterized protein.
    
 0.676
GATA2
GATA binding protein 2.
    
 0.672
lhx4
LIM homeobox 4.
    
 0.649
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.