STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103378089RAB4B, member RAS oncogene family. (236 aa)    
Predicted Functional Partners:
rbsn
Rabenosyn, RAB effector.
    
 
 0.856
ENSCSEP00000004017
Intersectin 2a.
    
 0.820
ENSCSEP00000012919
Uncharacterized protein.
    
 0.820
ENSCSEP00000012961
Uncharacterized protein.
    
 0.820
ENSCSEP00000001081
Uncharacterized protein.
   
 0.733
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.720
tbc1d16
TBC1 domain family, member 16.
    
 0.716
rabggtb
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.679
LOC103385716
Macrophage stimulating 1 receptor a.
   
 0.677
LOC103386279
Macrophage stimulating 1 receptor b.
   
 0.677
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.