STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSEP00000014742Secretory calcium-binding phosphoprotein 5. (165 aa)    
Predicted Functional Partners:
LOC103383837
Odontogenic, ameloblast associated.
      
 0.865
LOC103389273
Secreted phosphoprotein 1.
    
 0.693
ENSCSEP00000014837
Uncharacterized protein.
      
 0.676
ENSCSEP00000025543
Fibroblast growth factor receptor.
      
 0.636
LOC103384774
HMG box domain-containing protein.
     
 0.607
LOC107988365
HMG box domain-containing protein.
     
 0.607
ENSCSEP00000002772
Fibroblast growth factor receptor.
      
 0.605
fgfr3
Fibroblast growth factor receptor.
      
 0.559
LOC103394864
Transcription factor 7.
     
 0.487
lef1
Lymphoid enhancer-binding factor 1.
     
 0.470
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.