STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103378148Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (357 aa)    
Predicted Functional Partners:
LOC103397131
MARVEL domain-containing protein.
   
 
 0.584
LOC103389949
Occludin a.
    
 
 0.574
LOC103378762
Tight junction protein 1a; Belongs to the MAGUK family.
   
 
 0.486
LOC103380472
Tight junction protein 1b; Belongs to the MAGUK family.
   
 
 0.486
pex19
Peroxisomal biogenesis factor 19.
    
 0.478
pex3
Peroxisomal biogenesis factor 3.
     
 0.467
LOC103397562
Occludin b.
    
 
 0.453
pex13
Peroxisomal biogenesis factor 13.
     
 0.446
pex16
Peroxisomal membrane protein PEX16.
     
 0.434
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.431
Your Current Organism:
Cynoglossus semilaevis
NCBI taxonomy Id: 244447
Other names: C. semilaevis, Cynoglossus (Arelia) semilaevis, half-smooth tongue sole, tongue sole
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.